Designing Graphical Data Storage Model for Gene-Protein and Gene-Gene Interaction Networks
Journal Title: International Journal of Advanced Computer Science & Applications - Year 2017, Vol 8, Issue 5
Abstract
Graph is an expressive way to represent dynamic and complex relationships in highly connected data. In today’s highly connected world, general purpose graph databases are providing opportunities to experience benefits of semantically significant networks without investing on the graph infrastructure. Examples of prominent graph databases are: Neo4j, Titan and OrientDB etc. In biological OMICS landscape, Interactomics is one of the new disciplines that focuses mainly on the data modeling, data storage and retrieval of biological interaction data. Biological experiments generate prodigious amount of data in various formats(semi-structured or unstructured). The large volume of such data posses challenges for data acquisition, data integration, multiple data modalities (either data model of storage model, storage, processing and visualization. This paper aims at designing a well suited graphical data storage model for biological information which is collected from major heterogeneous biological data repositories, by using graph database.
Authors and Affiliations
Hina Farooq, Javed Ferzund, Azka Mahmood, Muhammad Atif Sarwar
Keywords
Related Articles
- EP ID EP259130
- DOI 10.14569/IJACSA.2017.080559
- Views 93
- Downloads 0
A Comparative Study of Classification Algorithms using Data Mining: Crime and Accidents in Denver City the USA
In the last five years, crime and accidents rates have increased in many cities of America. The advancement of new technologies can also lead to criminal misuse. In order to reduce incidents, there is a need to understan...
Portable Facial Recognition Jukebox Using Fisherfaces (Frj)
A portable real-time facial recognition system that is able to play personalized music based on the identified person’s preferences was developed. The system is called Portable Facial Recognition Jukebox Using Fisherface...
An Enhancement on Mobile Social Network using Social Link Prediction with Improved Human Trajectory Internet Data Mining
Generally, the mobile social network has missing and unauthentic links. The prediction of those links is one of the major problems to understand the relationship between two nodes and recommends the potential links to th...
Debranding in Fantasy Realms: Perceived Marketing Opportunities within the Virtual World
This paper discusses the application of the concept of debranding within immersive virtual environments. In particular the issue of the media richness and vividness of experience is considered in these experience realms...
Allocation of Roadside Units for Certificate Update in Vehicular Ad Hoc Network Environments
The roadside unit (RSU) plays an important role in VANET environments for privacy preservation. In order to conserve the privacy of a vehicle, the issued certificate must be updated frequently via RSUs. If a certificate...