INGDIF - SIMPLE MEASURE BASED ON ANALYSIS OF GENETIC DIFFERENTIATION
Journal Title: Genetics & Applications - Year 2017, Vol 1, Issue 2
Abstract
We suggest simple measure based on the analyses of genetic differentiation. The purpose of this measurement is to estimate deviation of each locus FST (GST, θ) from overall value. This index of genetic differentiation (I) is represented as (FSTk-FST)/FST, where FSTk is value for individual locus and FST for all loci. Index for each locus shows intensity and direction of deviation from overall value. Statistical probability is estimated by permutation (recommended 1000-10000). Thus, it is possible to make assessment of the relevance of impact of genetic differentiation at individual loci to the overall genetic differentiation. Additionally, relative genetic differentiation (R) is proportion of FST deviation of every locus within total deviation (all observed loci from overall FST value).
Authors and Affiliations
Naris Pojskić
Keywords
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- EP ID EP349749
- DOI 10.31383/ga.vol1iss2pp56-58
- Views 114
- Downloads 0
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